WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C13F10.4.1 Sequence Name  C13F10.4.1
Length (nt)  6572   Chromosome Location  V: 7205626-7214902
Chromosome . Primary Identifier  V Chromosome Location . Start  7205626
Chromosome Location . End  7214902 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C13F10.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015743 soap-1 C13F10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C13F10.4 C13F10.4 6231   V: 7205952-7206014

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C13F10.4.1 7205626 7214902 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon187050   389   V: 7205626-7206014 Caenorhabditis elegans
Exon187051   650   V: 7206068-7206717 Caenorhabditis elegans
Exon187052   2161   V: 7206765-7208925 Caenorhabditis elegans
Exon187053   291   V: 7208979-7209269 Caenorhabditis elegans
Exon187054   546   V: 7209322-7209867 Caenorhabditis elegans
Exon187055   252   V: 7209916-7210167 Caenorhabditis elegans
Exon187056   277   V: 7210604-7210880 Caenorhabditis elegans
Exon187057   918   V: 7211250-7212167 Caenorhabditis elegans
Exon187058   116   V: 7213004-7213119 Caenorhabditis elegans
Exon187059   167   V: 7213172-7213338 Caenorhabditis elegans
Exon187060   449   V: 7214045-7214493 Caenorhabditis elegans
Exon187061   356   V: 7214547-7214902 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C13F10.4.1 7205626 7214902 -1

1 Sequence

Length
6572

1 Sequence Ontology Term

Identifier Name Description
transcript