WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C13A2.1.1 Sequence Name  C13A2.1.1
Length (nt)  2193   Chromosome Location  V: 7288999-7292223
Chromosome . Primary Identifier  V Chromosome Location . Start  7288999
Chromosome Location . End  7292223 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C13A2.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015718 C13A2.1 C13A2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C13A2.1 C13A2.1 1497   V: 7289494-7289657

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C13A2.1.1 7288999 7292223 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon187213   139   V: 7288999-7289137 Caenorhabditis elegans
Exon187215   329   V: 7289329-7289657 Caenorhabditis elegans
Exon187216   141   V: 7289706-7289846 Caenorhabditis elegans
Exon187218   106   V: 7290021-7290126 Caenorhabditis elegans
Exon187220   113   V: 7290180-7290292 Caenorhabditis elegans
Exon187222   79   V: 7290338-7290416 Caenorhabditis elegans
Exon187224   132   V: 7290462-7290593 Caenorhabditis elegans
Exon187226   213   V: 7290638-7290850 Caenorhabditis elegans
Exon187228   135   V: 7290902-7291036 Caenorhabditis elegans
Exon187230   806   V: 7291418-7292223 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C13A2.1.1 7288999 7292223 1

1 Sequence

Length
2193

1 Sequence Ontology Term

Identifier Name Description
transcript