WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13D7.4.1 Sequence Name  R13D7.4.1
Length (nt)  903   Chromosome Location  V: 7400888-7402192
Chromosome . Primary Identifier  V Chromosome Location . Start  7400888
Chromosome Location . End  7402192 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13D7.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005951 srx-60 R13D7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13D7.4 R13D7.4 903   V: 7400888-7400926

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13D7.4.1 7400888 7402192 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon187531   39   V: 7400888-7400926 Caenorhabditis elegans
Exon187532   161   V: 7400972-7401132 Caenorhabditis elegans
Exon187533   221   V: 7401176-7401396 Caenorhabditis elegans
Exon187534   173   V: 7401619-7401791 Caenorhabditis elegans
Exon187535   182   V: 7401837-7402018 Caenorhabditis elegans
Exon187536   127   V: 7402066-7402192 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13D7.4.1 7400888 7402192 1

1 Sequence

Length
903

1 Sequence Ontology Term

Identifier Name Description
transcript