WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25E5.2.2 Sequence Name  F25E5.2.2
Length (nt)  1221   Chromosome Location  V: 7455308-7457598
Chromosome . Primary Identifier  V Chromosome Location . Start  7455308
Chromosome Location . End  7457598 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25E5.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017783 F25E5.2 F25E5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25E5.2 F25E5.2 1017   V: 7455827-7456058

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25E5.2.2 7455308 7457598 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon187672   47   V: 7455308-7455354 Caenorhabditis elegans
Exon187674   241   V: 7455818-7456058 Caenorhabditis elegans
Exon187676   77   V: 7456103-7456179 Caenorhabditis elegans
Exon187678   143   V: 7456448-7456590 Caenorhabditis elegans
Exon187680   141   V: 7456743-7456883 Caenorhabditis elegans
Exon187682   138   V: 7456929-7457066 Caenorhabditis elegans
Exon187684   158   V: 7457123-7457280 Caenorhabditis elegans
Exon187686   276   V: 7457323-7457598 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25E5.2.2 7455308 7457598 1

1 Sequence

Length
1221

1 Sequence Ontology Term

Identifier Name Description
transcript