WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25E5.1.1 Sequence Name  F25E5.1.1
Length (nt)  3632   Chromosome Location  V: 7465884-7471288
Chromosome . Primary Identifier  V Chromosome Location . Start  7465884
Chromosome Location . End  7471288 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25E5.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017782 F25E5.1 F25E5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25E5.1 F25E5.1 3189   V: 7465897-7465929

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F25E5.1.1 7465884 7471288 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon187754   46   V: 7465884-7465929 Caenorhabditis elegans
Exon187755   82   V: 7465983-7466064 Caenorhabditis elegans
Exon187756   98   V: 7466110-7466207 Caenorhabditis elegans
Exon187757   133   V: 7466254-7466386 Caenorhabditis elegans
Exon187758   278   V: 7466787-7467064 Caenorhabditis elegans
Exon187759   261   V: 7467201-7467461 Caenorhabditis elegans
Exon187760   121   V: 7467511-7467631 Caenorhabditis elegans
Exon187761   122   V: 7467678-7467799 Caenorhabditis elegans
Exon187762   72   V: 7467862-7467933 Caenorhabditis elegans
Exon187763   223   V: 7467983-7468205 Caenorhabditis elegans
Exon187764   265   V: 7468579-7468843 Caenorhabditis elegans
Exon187765   123   V: 7468888-7469010 Caenorhabditis elegans
Exon187766   507   V: 7469059-7469565 Caenorhabditis elegans
Exon187767   244   V: 7469676-7469919 Caenorhabditis elegans
Exon187768   82   V: 7469967-7470048 Caenorhabditis elegans
Exon187769   145   V: 7470091-7470235 Caenorhabditis elegans
Exon187770   187   V: 7470391-7470577 Caenorhabditis elegans
Exon187771   643   V: 7470646-7471288 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F25E5.1.1 7465884 7471288 1

1 Sequence

Length
3632

1 Sequence Ontology Term

Identifier Name Description
transcript