WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C04F2.1.1 Sequence Name  C04F2.1.1
Length (nt)  1138   Chromosome Location  V: 7497740-7499128
Chromosome . Primary Identifier  V Chromosome Location . Start  7497740
Chromosome Location . End  7499128 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04F2.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005300 srh-79 C04F2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C04F2.1 C04F2.1 1065   V: 7497740-7497951

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C04F2.1.1 7497740 7499128 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon187782   212   V: 7497740-7497951 Caenorhabditis elegans
Exon187784   146   V: 7497997-7498142 Caenorhabditis elegans
Exon187785   513   V: 7498301-7498813 Caenorhabditis elegans
Exon187786   267   V: 7498862-7499128 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C04F2.1.1 7497740 7499128 1

1 Sequence

Length
1138

1 Sequence Ontology Term

Identifier Name Description
transcript