WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50E3.9.1 Sequence Name  C50E3.9.1
Length (nt)  1077   Chromosome Location  V: 7598994-7600249
Chromosome . Primary Identifier  V Chromosome Location . Start  7598994
Chromosome Location . End  7600249 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50E3.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016820 C50E3.9 C50E3.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50E3.9 C50E3.9 1077   V: 7598994-7599248

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C50E3.9.1 7598994 7600249 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon188044   255   V: 7598994-7599248 Caenorhabditis elegans
Exon188045   162   V: 7599296-7599457 Caenorhabditis elegans
Exon188046   393   V: 7599511-7599903 Caenorhabditis elegans
Exon188047   267   V: 7599983-7600249 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C50E3.9.1 7598994 7600249 -1

1 Sequence

Length
1077

1 Sequence Ontology Term

Identifier Name Description
transcript