WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50E3.3.1 Sequence Name  C50E3.3.1
Length (nt)  1050   Chromosome Location  V: 7605158-7607211
Chromosome . Primary Identifier  V Chromosome Location . Start  7605158
Chromosome Location . End  7607211 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50E3.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016815 clec-213 C50E3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50E3.3 C50E3.3 1050   V: 7605158-7605400

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C50E3.3.1 7605158 7607211 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon188058   243   V: 7605158-7605400 Caenorhabditis elegans
Exon188059   99   V: 7605449-7605547 Caenorhabditis elegans
Exon188060   126   V: 7605948-7606073 Caenorhabditis elegans
Exon188061   127   V: 7606436-7606562 Caenorhabditis elegans
Exon188062   119   V: 7606664-7606782 Caenorhabditis elegans
Exon188063   150   V: 7606824-7606973 Caenorhabditis elegans
Exon188064   186   V: 7607026-7607211 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C50E3.3.1 7605158 7607211 1

1 Sequence

Length
1050

1 Sequence Ontology Term

Identifier Name Description
transcript