WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50E3.12.1 Sequence Name  C50E3.12.1
Length (nt)  1333   Chromosome Location  V: 7620504-7622061
Chromosome . Primary Identifier  V Chromosome Location . Start  7620504
Chromosome Location . End  7622061 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50E3.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016823 C50E3.12 C50E3.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50E3.12 C50E3.12 1149   V: 7620656-7621459

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C50E3.12.1 7620504 7622061 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon188088   956   V: 7620504-7621459 Caenorhabditis elegans
Exon188089   99   V: 7621513-7621611 Caenorhabditis elegans
Exon188090   105   V: 7621666-7621770 Caenorhabditis elegans
Exon188091   102   V: 7621832-7621933 Caenorhabditis elegans
Exon188092   71   V: 7621991-7622061 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C50E3.12.1 7620504 7622061 -1

1 Sequence

Length
1333

1 Sequence Ontology Term

Identifier Name Description
transcript