WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK105.3.1 Sequence Name  ZK105.3.1
Length (nt)  2463   Chromosome Location  V: 7697142-7700814
Chromosome . Primary Identifier  V Chromosome Location . Start  7697142
Chromosome Location . End  7700814 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK105.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022654 ZK105.3 ZK105.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK105.3 ZK105.3 2409   V: 7697142-7697333

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK105.3.1 7697142 7700814 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon188226   192   V: 7697142-7697333 Caenorhabditis elegans
Exon188227   115   V: 7697377-7697491 Caenorhabditis elegans
Exon188228   122   V: 7697541-7697662 Caenorhabditis elegans
Exon188229   86   V: 7697750-7697835 Caenorhabditis elegans
Exon188230   79   V: 7697883-7697961 Caenorhabditis elegans
Exon188231   107   V: 7698137-7698243 Caenorhabditis elegans
Exon188232   165   V: 7698289-7698453 Caenorhabditis elegans
Exon188233   321   V: 7698497-7698817 Caenorhabditis elegans
Exon188234   142   V: 7699017-7699158 Caenorhabditis elegans
Exon188235   76   V: 7699219-7699294 Caenorhabditis elegans
Exon188236   83   V: 7699336-7699418 Caenorhabditis elegans
Exon188237   373   V: 7699491-7699863 Caenorhabditis elegans
Exon188238   172   V: 7699917-7700088 Caenorhabditis elegans
Exon188239   120   V: 7700291-7700410 Caenorhabditis elegans
Exon188240   132   V: 7700458-7700589 Caenorhabditis elegans
Exon188241   178   V: 7700637-7700814 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK105.3.1 7697142 7700814 1

1 Sequence

Length
2463

1 Sequence Ontology Term

Identifier Name Description
transcript