WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05B11.6.1 Sequence Name  T05B11.6.1
Length (nt)  1158   Chromosome Location  V: 7735619-7737024
Chromosome . Primary Identifier  V Chromosome Location . Start  7735619
Chromosome Location . End  7737024 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05B11.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005661 srr-10 T05B11.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05B11.6 T05B11.6 1158   V: 7735619-7735649

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05B11.6.1 7735619 7737024 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon188303   31   V: 7735619-7735649 Caenorhabditis elegans
Exon188304   170   V: 7735695-7735864 Caenorhabditis elegans
Exon188305   281   V: 7735918-7736198 Caenorhabditis elegans
Exon188306   318   V: 7736272-7736589 Caenorhabditis elegans
Exon188307   358   V: 7736667-7737024 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05B11.6.1 7735619 7737024 1

1 Sequence

Length
1158

1 Sequence Ontology Term

Identifier Name Description
transcript