WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C37C3.6a.2 Sequence Name  C37C3.6a.2
Length (nt)  7907   Chromosome Location  V: 7827290-7842384
Chromosome . Primary Identifier  V Chromosome Location . Start  7827290
Chromosome Location . End  7842384 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C37C3.6a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003242 mig-6 C37C3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C37C3.6a C37C3.6a 4677   V: 7827300-7827395

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C37C3.6a.2 7827290 7842384 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon188461   106   V: 7827290-7827395 Caenorhabditis elegans
Exon188463   215   V: 7827451-7827665 Caenorhabditis elegans
Exon188467   156   V: 7828167-7828322 Caenorhabditis elegans
Exon188471   152   V: 7828370-7828521 Caenorhabditis elegans
Exon188475   757   V: 7828572-7829328 Caenorhabditis elegans
Exon188479   232   V: 7829453-7829684 Caenorhabditis elegans
Exon188483   122   V: 7829763-7829884 Caenorhabditis elegans
Exon188487   1585   V: 7829936-7831520 Caenorhabditis elegans
Exon188491   784   V: 7831588-7832371 Caenorhabditis elegans
Exon188495   213   V: 7832446-7832658 Caenorhabditis elegans
Exon188500   1816   V: 7832981-7834796 Caenorhabditis elegans
Exon188504   351   V: 7834847-7835197 Caenorhabditis elegans
Exon188508   79   V: 7835280-7835358 Caenorhabditis elegans
Exon188520   92   V: 7840437-7840528 Caenorhabditis elegans
Exon188523   589   V: 7840926-7841514 Caenorhabditis elegans
Exon188526   658   V: 7841727-7842384 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C37C3.6a.2 7827290 7842384 1

1 Sequence

Length
7907

1 Sequence Ontology Term

Identifier Name Description
transcript