WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C37C3.8c.1 Sequence Name  C37C3.8c.1
Length (nt)  1170   Chromosome Location  V: 7844619-7847164
Chromosome . Primary Identifier  V Chromosome Location . Start  7844619
Chromosome Location . End  7847164 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C37C3.8c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016500 memo-1 C37C3.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C37C3.8c C37C3.8c 1167   V: 7844619-7844684

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C37C3.8c.1 7844619 7847164 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon188541   66   V: 7844619-7844684 Caenorhabditis elegans
Exon188549   509   V: 7844738-7845246 Caenorhabditis elegans
Exon188557   113   V: 7845296-7845408 Caenorhabditis elegans
Exon188565   69   V: 7845461-7845529 Caenorhabditis elegans
Exon188572   168   V: 7845576-7845743 Caenorhabditis elegans
Exon188578   74   V: 7846095-7846168 Caenorhabditis elegans
Exon188587   171   V: 7846994-7847164 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C37C3.8c.1 7844619 7847164 -1

1 Sequence

Length
1170

1 Sequence Ontology Term

Identifier Name Description
transcript