WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F40A3.1.1 Sequence Name  F40A3.1.1
Length (nt)  863   Chromosome Location  V: 7891530-7895518
Chromosome . Primary Identifier  V Chromosome Location . Start  7891530
Chromosome Location . End  7895518 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40A3.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018216 F40A3.1 F40A3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F40A3.1 F40A3.1 561   V: 7891567-7891653

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F40A3.1.1 7891530 7895518 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon188662   124   V: 7891530-7891653 Caenorhabditis elegans
Exon188669   234   V: 7894331-7894564 Caenorhabditis elegans
Exon188670   137   V: 7894608-7894744 Caenorhabditis elegans
Exon188671   368   V: 7895151-7895518 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F40A3.1.1 7891530 7895518 1

1 Sequence

Length
863

1 Sequence Ontology Term

Identifier Name Description
transcript