WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y97E10B.7b.1 Sequence Name  Y97E10B.7b.1
Length (nt)  1962   Chromosome Location  V: 7930475-7933098
Chromosome . Primary Identifier  V Chromosome Location . Start  7930475
Chromosome Location . End  7933098 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y97E10B.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003575 ncx-10 Y97E10B.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y97E10B.7b Y97E10B.7b 1656   V: 7930475-7930593

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y97E10B.7b.1 7930475 7933098 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon188707   119   V: 7930475-7930593 Caenorhabditis elegans
Exon188709   421   V: 7930656-7931076 Caenorhabditis elegans
Exon188711   548   V: 7931126-7931673 Caenorhabditis elegans
Exon188713   108   V: 7931763-7931870 Caenorhabditis elegans
Exon188715   96   V: 7931919-7932014 Caenorhabditis elegans
Exon188717   103   V: 7932060-7932162 Caenorhabditis elegans
Exon188719   180   V: 7932208-7932387 Caenorhabditis elegans
Exon188721   132   V: 7932514-7932645 Caenorhabditis elegans
Exon188722   181   V: 7932723-7932903 Caenorhabditis elegans
Exon188724   74   V: 7933025-7933098 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y97E10B.7b.1 7930475 7933098 -1

1 Sequence

Length
1962

1 Sequence Ontology Term

Identifier Name Description
transcript