WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y97E10B.10.1 Sequence Name  Y97E10B.10.1
Length (nt)  1162   Chromosome Location  V: 7938605-7940399
Chromosome . Primary Identifier  V Chromosome Location . Start  7938605
Chromosome Location . End  7940399 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y97E10B.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022409 srt-53 Y97E10B.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y97E10B.10 Y97E10B.10 1146   V: 7938605-7938829

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y97E10B.10.1 7938605 7940399 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon188732   225   V: 7938605-7938829 Caenorhabditis elegans
Exon188733   80   V: 7938877-7938956 Caenorhabditis elegans
Exon188734   130   V: 7939061-7939190 Caenorhabditis elegans
Exon188735   470   V: 7939265-7939734 Caenorhabditis elegans
Exon188736   103   V: 7940094-7940196 Caenorhabditis elegans
Exon188737   154   V: 7940246-7940399 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y97E10B.10.1 7938605 7940399 -1

1 Sequence

Length
1162

1 Sequence Ontology Term

Identifier Name Description
transcript