WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F26D11.11c.1 Sequence Name  F26D11.11c.1
Length (nt)  2492   Chromosome Location  V: 7973078-7977628
Chromosome . Primary Identifier  V Chromosome Location . Start  7973078
Chromosome Location . End  7977628 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26D11.11c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002632 let-413 F26D11.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26D11.11c F26D11.11c 2121   V: 7973449-7973553

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F26D11.11c.1 7973078 7977628 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon188827   476   V: 7973078-7973553 Caenorhabditis elegans
Exon188836   262   V: 7974001-7974262 Caenorhabditis elegans
Exon188841   141   V: 7974924-7975064 Caenorhabditis elegans
Exon188846   623   V: 7975412-7976034 Caenorhabditis elegans
Exon188853   84   V: 7976084-7976167 Caenorhabditis elegans
Exon188859   230   V: 7976390-7976619 Caenorhabditis elegans
Exon188865   320   V: 7976676-7976995 Caenorhabditis elegans
Exon188871   255   V: 7977044-7977298 Caenorhabditis elegans
Exon188876   101   V: 7977528-7977628 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F26D11.11c.1 7973078 7977628 -1

1 Sequence

Length
2492

1 Sequence Ontology Term

Identifier Name Description
transcript