WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y97E10AR.2a.1 Sequence Name  Y97E10AR.2a.1
Length (nt)  2829   Chromosome Location  V: 7996178-8000233
Chromosome . Primary Identifier  V Chromosome Location . Start  7996178
Chromosome Location . End  8000233 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y97E10AR.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022397 Y97E10AR.2 Y97E10AR.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y97E10AR.2a Y97E10AR.2a 1998   V: 7996201-7996259

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y97E10AR.2a.1 7996178 8000233 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon188922   82   V: 7996178-7996259 Caenorhabditis elegans
Exon188924   250   V: 7996533-7996782 Caenorhabditis elegans
Exon188926   150   V: 7997317-7997466 Caenorhabditis elegans
Exon188927   69   V: 7997520-7997588 Caenorhabditis elegans
Exon188929   464   V: 7997644-7998107 Caenorhabditis elegans
Exon188931   123   V: 7998171-7998293 Caenorhabditis elegans
Exon188933   796   V: 7998384-7999179 Caenorhabditis elegans
Exon188936   546   V: 7999223-7999768 Caenorhabditis elegans
Exon188937   349   V: 7999885-8000233 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y97E10AR.2a.1 7996178 8000233 1

1 Sequence

Length
2829

1 Sequence Ontology Term

Identifier Name Description
transcript