WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F43H9.2a.1 Sequence Name  F43H9.2a.1
Length (nt)  1826   Chromosome Location  V: 8019157-8021715
Chromosome . Primary Identifier  V Chromosome Location . Start  8019157
Chromosome Location . End  8021715 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F43H9.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018398 sptl-2 F43H9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F43H9.2a F43H9.2a 1677   V: 8019164-8019210

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F43H9.2a.1 8019157 8021715 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon188977   54   V: 8019157-8019210 Caenorhabditis elegans
Exon188978   166   V: 8019265-8019430 Caenorhabditis elegans
Exon188981   132   V: 8019477-8019608 Caenorhabditis elegans
Exon188984   520   V: 8020005-8020524 Caenorhabditis elegans
Exon188987   719   V: 8020626-8021344 Caenorhabditis elegans
Exon188990   235   V: 8021481-8021715 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F43H9.2a.1 8019157 8021715 1

1 Sequence

Length
1826

1 Sequence Ontology Term

Identifier Name Description
transcript