WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC513.4.1 Sequence Name  ZC513.4.1
Length (nt)  3104   Chromosome Location  V: 8031411-8035025
Chromosome . Primary Identifier  V Chromosome Location . Start  8031411
Chromosome Location . End  8035025 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC513.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006935 vars-1 ZC513.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC513.4 ZC513.4 2937   V: 8031456-8031544

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC513.4.1 8031411 8035025 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon189017   134   V: 8031411-8031544 Caenorhabditis elegans
Exon189018   77   V: 8031587-8031663 Caenorhabditis elegans
Exon189019   122   V: 8031710-8031831 Caenorhabditis elegans
Exon189020   999   V: 8031877-8032875 Caenorhabditis elegans
Exon189021   122   V: 8033061-8033182 Caenorhabditis elegans
Exon189022   661   V: 8033228-8033888 Caenorhabditis elegans
Exon189023   132   V: 8033989-8034120 Caenorhabditis elegans
Exon189024   857   V: 8034169-8035025 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC513.4.1 8031411 8035025 1

1 Sequence

Length
3104

1 Sequence Ontology Term

Identifier Name Description
transcript