WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58G4.1.1 Sequence Name  F58G4.1.1
Length (nt)  6296   Chromosome Location  V: 8108970-8118131
Chromosome . Primary Identifier  V Chromosome Location . Start  8108970
Chromosome Location . End  8118131 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58G4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019064 myo-5 F58G4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58G4.1 F58G4.1 5925   V: 8109051-8109104

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58G4.1.1 8108970 8118131 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon189179   135   V: 8108970-8109104 Caenorhabditis elegans
Exon189180   279   V: 8109788-8110066 Caenorhabditis elegans
Exon189181   157   V: 8110119-8110275 Caenorhabditis elegans
Exon189182   195   V: 8110322-8110516 Caenorhabditis elegans
Exon189183   105   V: 8111177-8111281 Caenorhabditis elegans
Exon189184   342   V: 8111558-8111899 Caenorhabditis elegans
Exon189185   187   V: 8111949-8112135 Caenorhabditis elegans
Exon189186   256   V: 8112271-8112526 Caenorhabditis elegans
Exon189187   1955   V: 8112844-8114798 Caenorhabditis elegans
Exon189188   1369   V: 8115211-8116579 Caenorhabditis elegans
Exon189189   690   V: 8116644-8117333 Caenorhabditis elegans
Exon189190   96   V: 8117394-8117489 Caenorhabditis elegans
Exon189191   162   V: 8117553-8117714 Caenorhabditis elegans
Exon189192   368   V: 8117764-8118131 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58G4.1.1 8108970 8118131 1

1 Sequence

Length
6296

1 Sequence Ontology Term

Identifier Name Description
transcript