WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:D1014.3a Sequence Name  D1014.3a
Length (nt)  888   Chromosome Location  V: 8130620-8130679
Chromosome . Primary Identifier  V Chromosome Location . Start  8130620
Chromosome Location . End  8130679
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1014.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE38494 SNAP-1, isoform a 33.1 295 Caenorhabditis elegans
 

Other

32 RNAi

WormBase ID
WBRNAi00008568
WBRNAi00066838
WBRNAi00099786
WBRNAi00085394
WBRNAi00094141
WBRNAi00000161
WBRNAi00043342
WBRNAi00024932
WBRNAi00071721
WBRNAi00094273
WBRNAi00064982
WBRNAi00090884
WBRNAi00100759
WBRNAi00099180
WBRNAi00071549
WBRNAi00071548
WBRNAi00099584
WBRNAi00099382
WBRNAi00076254
WBRNAi00030319
WBRNAi00100011
WBRNAi00100198
WBRNAi00100385
WBRNAi00108864
WBRNAi00108919
WBRNAi00108974
WBRNAi00109085
WBRNAi00109029
WBRNAi00100946
WBRNAi00100572

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:D1014.3a 8130620 8130679 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017016 snap-1 D1014.3 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:D1014.3a 8130620 8130679 1
CDS:D1014.3a 8130889 8130963 1
CDS:D1014.3a 8131700 8131855 1
CDS:D1014.3a 8131905 8132264 1
CDS:D1014.3a 8132310 8132467 1
CDS:D1014.3a 8132978 8133056 1

1 Sequence

Length
888

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:D1014.3a.1 D1014.3a.1 1164   V: 8130617-8133329