WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1014.8.1 Sequence Name  D1014.8.1
Length (nt)  1908   Chromosome Location  V: 8126663-8129352
Chromosome . Primary Identifier  V Chromosome Location . Start  8126663
Chromosome Location . End  8129352 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1014.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005006 spr-1 D1014.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1014.8 D1014.8 1677   V: 8126891-8126968

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1014.8.1 8126663 8129352 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon189285   306   V: 8126663-8126968 Caenorhabditis elegans
Exon189286   110   V: 8127023-8127132 Caenorhabditis elegans
Exon189287   227   V: 8127179-8127405 Caenorhabditis elegans
Exon189288   154   V: 8127459-8127612 Caenorhabditis elegans
Exon189289   111   V: 8127658-8127768 Caenorhabditis elegans
Exon189290   133   V: 8127818-8127950 Caenorhabditis elegans
Exon189291   195   V: 8128288-8128482 Caenorhabditis elegans
Exon189292   162   V: 8128538-8128699 Caenorhabditis elegans
Exon189293   215   V: 8128750-8128964 Caenorhabditis elegans
Exon189294   91   V: 8129007-8129097 Caenorhabditis elegans
Exon189295   204   V: 8129149-8129352 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1014.8.1 8126663 8129352 -1

1 Sequence

Length
1908

1 Sequence Ontology Term

Identifier Name Description
transcript