WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F20D6.4b.2 Sequence Name  F20D6.4b.2
Length (nt)  1265   Chromosome Location  V: 8179126-8183251
Chromosome . Primary Identifier  V Chromosome Location . Start  8179126
Chromosome Location . End  8183251 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20D6.4b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005648 srp-7 F20D6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20D6.4b F20D6.4b 1101   V: 8181427-8181704

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F20D6.4b.2 8179126 8183251 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon189316   107   V: 8179126-8179232 Caenorhabditis elegans
Exon189320   279   V: 8181426-8181704 Caenorhabditis elegans
Exon189328   179   V: 8181751-8181929 Caenorhabditis elegans
Exon189334   323   V: 8181979-8182301 Caenorhabditis elegans
Exon189340   156   V: 8182349-8182504 Caenorhabditis elegans
Exon189347   221   V: 8183031-8183251 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F20D6.4b.2 8179126 8183251 1

1 Sequence

Length
1265

1 Sequence Ontology Term

Identifier Name Description
transcript