WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F20D6.3.1 Sequence Name  F20D6.3.1
Length (nt)  1272   Chromosome Location  V: 8183684-8185879
Chromosome . Primary Identifier  V Chromosome Location . Start  8183684
Chromosome Location . End  8185879 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20D6.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005649 srp-8 F20D6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20D6.3 F20D6.3 1119   V: 8183730-8183749

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F20D6.3.1 8183684 8185879 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon189349   66   V: 8183684-8183749 Caenorhabditis elegans
Exon189350   279   V: 8184395-8184673 Caenorhabditis elegans
Exon189351   179   V: 8184722-8184900 Caenorhabditis elegans
Exon189352   323   V: 8184947-8185269 Caenorhabditis elegans
Exon189353   156   V: 8185312-8185467 Caenorhabditis elegans
Exon189354   269   V: 8185611-8185879 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F20D6.3.1 8183684 8185879 1

1 Sequence

Length
1272

1 Sequence Ontology Term

Identifier Name Description
transcript