WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08D8.1.1 Sequence Name  C08D8.1.1
Length (nt)  1354   Chromosome Location  V: 8345759-8349909
Chromosome . Primary Identifier  V Chromosome Location . Start  8345759
Chromosome Location . End  8349909 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08D8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015592 C08D8.1 C08D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08D8.1 C08D8.1 1332   V: 8345781-8345865

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C08D8.1.1 8345759 8349909 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon189690   107   V: 8345759-8345865 Caenorhabditis elegans
Exon189691   73   V: 8347922-8347994 Caenorhabditis elegans
Exon189692   188   V: 8348035-8348222 Caenorhabditis elegans
Exon189693   97   V: 8348266-8348362 Caenorhabditis elegans
Exon189694   73   V: 8348475-8348547 Caenorhabditis elegans
Exon189695   121   V: 8348598-8348718 Caenorhabditis elegans
Exon189697   189   V: 8348770-8348958 Caenorhabditis elegans
Exon189699   169   V: 8349262-8349430 Caenorhabditis elegans
Exon189700   139   V: 8349480-8349618 Caenorhabditis elegans
Exon189701   113   V: 8349660-8349772 Caenorhabditis elegans
Exon189702   85   V: 8349825-8349909 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C08D8.1.1 8345759 8349909 1

1 Sequence

Length
1354

1 Sequence Ontology Term

Identifier Name Description
transcript