WormMine: Gene WBGene00044126

• WormBase Gene ID: WBGene00044126
• Gene Name: srsx-23
• Sequence Name: F38E1.12
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by several genes including dpy-21; ints-8; and daf-2 based on RNA-seq and microarray studies.
• Biotype: SO:0000336
• Genetic Position: V :1.31323 ±0.003941
• Length (nt): 1216

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00044126

Genomics

0 Transcripts

Other

0 CDSs

0 RNAi Result

19 Allele

• gk963301
• WBVar02060338
• gk964351
• gk962860
• gk964052
• WBVar01862999
• WBVar01862998
• WBVar01863000
• gk368548
• gk453150
• gk321297
• gk445508
• gk476745
• gk241251
• WBVar02046254
• gk241249
• gk241250
• gk450426
• gk334747

1 Chromosome

• WormBase ID: V
• Organism: Caenorhabditis elegans
• Length (nt): 20924180

1 Chromosome Location

• Feature . Primary Identifier: WBGene00044126
• Start: 8353793
• End: 8355008
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrV_8355009..8355987
• Length (nt): 979
• Chromosome Location: V: 8355009-8355987
• Organism: Caenorhabditis elegans

5 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression in daf-2(e1370) neurons comparing to in N2 neurons at day 8adult stage.	DESeq2, FDR < 0.05, fold change > 2.	WBPaper00066978:daf-2(e1370)_upregulated_neuron
	Transcripts that showed significantly increased expression in daf-16(mu86);daf-2(e1370) neurons comparing to in daf-2(e1370) neurons at day 8adult stage.	DESeq2, FDR < 0.05, fold change > 2.	WBPaper00066978:daf-16(mu86)_upregulated_neuron
	Transcripts that showed significantly decreased expression in daf-2(e1370) comparing to in N2.	Student's t-test, fold change > 2, p-value < 0.05.	WBPaper00055386:daf-2(e1370)_downregulated
	Transcripts that showed significantly decreased expression in dpy-21(e428) comparing to in N2 during L3 stage.	DESeq v1.6.3. Fold change > 1.5.	WBPaper00050370:dpy-21(e428)_L3_downregulated
	Transcripts that showed significantly increased expression in ints-8(RNAi) comparing to in N2.	DESeq2 and edgeR.	WBPaper00056284:ints-8(RNAi)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00044126
• Start: 8353793
• End: 8355008
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 1216

1 Sequence Ontology Term