WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F38E1.3.1 Sequence Name  F38E1.3.1
Length (nt)  1031   Chromosome Location  V: 8376149-8377944
Chromosome . Primary Identifier  V Chromosome Location . Start  8376149
Chromosome Location . End  8377944 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38E1.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018178 F38E1.3 F38E1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38E1.3 F38E1.3 933   V: 8376193-8376234

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F38E1.3.1 8376149 8377944 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon189747   86   V: 8376149-8376234 Caenorhabditis elegans
Exon189748   165   V: 8376279-8376443 Caenorhabditis elegans
Exon189749   153   V: 8376635-8376787 Caenorhabditis elegans
Exon189750   138   V: 8376900-8377037 Caenorhabditis elegans
Exon189751   267   V: 8377096-8377362 Caenorhabditis elegans
Exon189752   117   V: 8377673-8377789 Caenorhabditis elegans
Exon189753   105   V: 8377840-8377944 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F38E1.3.1 8376149 8377944 1

1 Sequence

Length
1031

1 Sequence Ontology Term

Identifier Name Description
transcript