WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52E1.9b.1 Sequence Name  F52E1.9b.1
Length (nt)  546   Chromosome Location  V: 8398595-8402636
Chromosome . Primary Identifier  V Chromosome Location . Start  8398595
Chromosome Location . End  8402636 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52E1.9b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018697 F52E1.9 F52E1.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52E1.9b F52E1.9b 546   V: 8398595-8398698

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52E1.9b.1 8398595 8402636 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon189843   104   V: 8398595-8398698 Caenorhabditis elegans
Exon189846   118   V: 8398749-8398866 Caenorhabditis elegans
Exon189849   149   V: 8398915-8399063 Caenorhabditis elegans
Exon189852   150   V: 8399199-8399348 Caenorhabditis elegans
Exon189853   25   V: 8402612-8402636 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52E1.9b.1 8398595 8402636 -1

1 Sequence

Length
546

1 Sequence Ontology Term

Identifier Name Description
transcript