WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52E1.13e.1 Sequence Name  F52E1.13e.1
Length (nt)  2991   Chromosome Location  V: 8415686-8444770
Chromosome . Primary Identifier  V Chromosome Location . Start  8415686
Chromosome Location . End  8444770 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52E1.13e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018700 lmd-3 F52E1.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52E1.13e F52E1.13e 2499   V: 8416178-8416293

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52E1.13e.1 8415686 8444770 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon189871   608   V: 8415686-8416293 Caenorhabditis elegans
Exon189879   110   V: 8416348-8416457 Caenorhabditis elegans
Exon189885   269   V: 8416512-8416780 Caenorhabditis elegans
Exon189891   167   V: 8417734-8417900 Caenorhabditis elegans
Exon189903   106   V: 8427534-8427639 Caenorhabditis elegans
Exon189909   76   V: 8428282-8428357 Caenorhabditis elegans
Exon189915   70   V: 8428549-8428618 Caenorhabditis elegans
Exon189922   170   V: 8429200-8429369 Caenorhabditis elegans
Exon189927   119   V: 8429809-8429927 Caenorhabditis elegans
Exon189933   102   V: 8430501-8430602 Caenorhabditis elegans
Exon189939   157   V: 8432845-8433001 Caenorhabditis elegans
Exon189945   371   V: 8433045-8433415 Caenorhabditis elegans
Exon189951   124   V: 8433463-8433586 Caenorhabditis elegans
Exon189957   283   V: 8433638-8433920 Caenorhabditis elegans
Exon189963   226   V: 8434082-8434307 Caenorhabditis elegans
Exon189969   33   V: 8444738-8444770 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52E1.13e.1 8415686 8444770 -1

1 Sequence

Length
2991

1 Sequence Ontology Term

Identifier Name Description
transcript