WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52E1.13e.1 Sequence Name  F52E1.13e.1
Length (nt)  2991   Chromosome Location  V: 8415686-8444770
Chromosome . Primary Identifier  V Chromosome Location . Start  8415686
Chromosome Location . End  8444770 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52E1.13e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018700 lmd-3 F52E1.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52E1.13e F52E1.13e 2499   V: 8416178-8416293

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52E1.13e.1 8415686 8444770 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon189926   608   V: 8415686-8416293 Caenorhabditis elegans
Exon189934   110   V: 8416348-8416457 Caenorhabditis elegans
Exon189940   269   V: 8416512-8416780 Caenorhabditis elegans
Exon189946   167   V: 8417734-8417900 Caenorhabditis elegans
Exon189958   106   V: 8427534-8427639 Caenorhabditis elegans
Exon189964   76   V: 8428282-8428357 Caenorhabditis elegans
Exon189970   70   V: 8428549-8428618 Caenorhabditis elegans
Exon189977   170   V: 8429200-8429369 Caenorhabditis elegans
Exon189982   119   V: 8429809-8429927 Caenorhabditis elegans
Exon189988   102   V: 8430501-8430602 Caenorhabditis elegans
Exon189994   157   V: 8432845-8433001 Caenorhabditis elegans
Exon190000   371   V: 8433045-8433415 Caenorhabditis elegans
Exon190006   124   V: 8433463-8433586 Caenorhabditis elegans
Exon190012   283   V: 8433638-8433920 Caenorhabditis elegans
Exon190018   226   V: 8434082-8434307 Caenorhabditis elegans
Exon190024   33   V: 8444738-8444770 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52E1.13e.1 8415686 8444770 -1

1 Sequence

Length
2991

1 Sequence Ontology Term

Identifier Name Description
transcript