WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F52E1.13f Sequence Name  F52E1.13f
Length (nt)  2460   Chromosome Location  V: 8416178-8416293
Chromosome . Primary Identifier  V Chromosome Location . Start  8416178
Chromosome Location . End  8416293
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52E1.13f

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33103 LMD-3, isoform f 89.6 819 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00113264
WBRNAi00047982
WBRNAi00015409
WBRNAi00032617
WBRNAi00113126
WBRNAi00113035
WBRNAi00094946
WBRNAi00090660

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F52E1.13f 8416178 8416293 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018700 lmd-3 F52E1.13 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:F52E1.13f 8416178 8416293 -1
CDS:F52E1.13f 8416348 8416457 -1
CDS:F52E1.13f 8416512 8416780 -1
CDS:F52E1.13f 8417734 8417900 -1
CDS:F52E1.13f 8427534 8427639 -1
CDS:F52E1.13f 8428282 8428357 -1
CDS:F52E1.13f 8428549 8428618 -1
CDS:F52E1.13f 8429200 8429363 -1
CDS:F52E1.13f 8429809 8429927 -1
CDS:F52E1.13f 8430501 8430602 -1
CDS:F52E1.13f 8432845 8433001 -1
CDS:F52E1.13f 8433045 8433415 -1
CDS:F52E1.13f 8433463 8433586 -1
CDS:F52E1.13f 8433638 8433920 -1
CDS:F52E1.13f 8434082 8434307 -1

1 Sequence

Length
2460

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F52E1.13f.1 F52E1.13f.1 2951   V: 8415687-8434307