WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52E1.13d.1 Sequence Name  F52E1.13d.1
Length (nt)  1938   Chromosome Location  V: 8422660-8438409
Chromosome . Primary Identifier  V Chromosome Location . Start  8422660
Chromosome Location . End  8438409 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52E1.13d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018700 lmd-3 F52E1.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52E1.13d F52E1.13d 1938   V: 8422660-8422736

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52E1.13d.1 8422660 8438409 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon189952   77   V: 8422660-8422736 Caenorhabditis elegans
Exon189957   106   V: 8427534-8427639 Caenorhabditis elegans
Exon189963   76   V: 8428282-8428357 Caenorhabditis elegans
Exon189969   70   V: 8428549-8428618 Caenorhabditis elegans
Exon189975   164   V: 8429200-8429363 Caenorhabditis elegans
Exon189981   119   V: 8429809-8429927 Caenorhabditis elegans
Exon189987   102   V: 8430501-8430602 Caenorhabditis elegans
Exon189993   157   V: 8432845-8433001 Caenorhabditis elegans
Exon189999   371   V: 8433045-8433415 Caenorhabditis elegans
Exon190005   124   V: 8433463-8433586 Caenorhabditis elegans
Exon190011   283   V: 8433638-8433920 Caenorhabditis elegans
Exon190017   226   V: 8434082-8434307 Caenorhabditis elegans
Exon190022   63   V: 8438347-8438409 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52E1.13d.1 8422660 8438409 -1

1 Sequence

Length
1938

1 Sequence Ontology Term

Identifier Name Description
transcript