WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45F2.10.4 Sequence Name  F45F2.10.4
Length (nt)  4246   Chromosome Location  V: 8513573-8518872
Chromosome . Primary Identifier  V Chromosome Location . Start  8513573
Chromosome Location . End  8518872 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45F2.10.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018482 F45F2.10 F45F2.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45F2.10 F45F2.10 2943   V: 8514360-8514871

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45F2.10.4 8513573 8518872 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190091   726   V: 8513573-8514298 Caenorhabditis elegans
Exon190097   527   V: 8514345-8514871 Caenorhabditis elegans
Exon190101   110   V: 8514912-8515021 Caenorhabditis elegans
Exon190105   221   V: 8515072-8515292 Caenorhabditis elegans
Exon190109   51   V: 8515348-8515398 Caenorhabditis elegans
Exon190113   249   V: 8515535-8515783 Caenorhabditis elegans
Exon190117   919   V: 8515889-8516807 Caenorhabditis elegans
Exon190121   413   V: 8516855-8517267 Caenorhabditis elegans
Exon190125   278   V: 8517332-8517609 Caenorhabditis elegans
Exon190129   752   V: 8518121-8518872 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45F2.10.4 8513573 8518872 -1

1 Sequence

Length
4246

1 Sequence Ontology Term

Identifier Name Description
transcript