WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45F2.10.1 Sequence Name  F45F2.10.1
Length (nt)  3914   Chromosome Location  V: 8513577-8518764
Chromosome . Primary Identifier  V Chromosome Location . Start  8513577
Chromosome Location . End  8518764 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45F2.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018482 F45F2.10 F45F2.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45F2.10 F45F2.10 2943   V: 8514360-8514871

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45F2.10.1 8513577 8518764 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190147   722   V: 8513577-8514298 Caenorhabditis elegans
Exon190149   527   V: 8514345-8514871 Caenorhabditis elegans
Exon190153   110   V: 8514912-8515021 Caenorhabditis elegans
Exon190157   221   V: 8515072-8515292 Caenorhabditis elegans
Exon190161   51   V: 8515348-8515398 Caenorhabditis elegans
Exon190165   249   V: 8515535-8515783 Caenorhabditis elegans
Exon190169   919   V: 8515889-8516807 Caenorhabditis elegans
Exon190173   413   V: 8516855-8517267 Caenorhabditis elegans
Exon190177   278   V: 8517332-8517609 Caenorhabditis elegans
Exon190182   227   V: 8518121-8518347 Caenorhabditis elegans
Exon190185   197   V: 8518568-8518764 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45F2.10.1 8513577 8518764 -1

1 Sequence

Length
3914

1 Sequence Ontology Term

Identifier Name Description
transcript