WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F45F2.11a Sequence Name  F45F2.11a
Length (nt)  939   Chromosome Location  V: 8519346-8519553
Chromosome . Primary Identifier  V Chromosome Location . Start  8519346
Chromosome Location . End  8519553
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45F2.11a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40062 F45F2.11, isoform a 35.6 312 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00047422
WBRNAi00007825
WBRNAi00015035
WBRNAi00032314

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F45F2.11a 8519346 8519553 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018483 F45F2.11 F45F2.11 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F45F2.11a 8519346 8519553 -1
CDS:F45F2.11a 8519609 8519701 -1
CDS:F45F2.11a 8519745 8520235 -1
CDS:F45F2.11a 8520279 8520425 -1

1 Sequence

Length
939

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F45F2.11a.1 F45F2.11a.1 1724   V: 8518934-8520896
Transcript:F45F2.11a.2 F45F2.11a.2 1715   V: 8518934-8520846