WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45F2.11b.1 Sequence Name  F45F2.11b.1
Length (nt)  1304   Chromosome Location  V: 8519346-8520888
Chromosome . Primary Identifier  V Chromosome Location . Start  8519346
Chromosome Location . End  8520888 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45F2.11b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018483 F45F2.11 F45F2.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45F2.11b F45F2.11b 1221   V: 8519346-8519553

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45F2.11b.1 8519346 8520888 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190189   208   V: 8519346-8519553 Caenorhabditis elegans
Exon190192   93   V: 8519609-8519701 Caenorhabditis elegans
Exon190195   491   V: 8519745-8520235 Caenorhabditis elegans
Exon190198   358   V: 8520279-8520636 Caenorhabditis elegans
Exon190200   69   V: 8520694-8520762 Caenorhabditis elegans
Exon190202   85   V: 8520804-8520888 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45F2.11b.1 8519346 8520888 -1

1 Sequence

Length
1304

1 Sequence Ontology Term

Identifier Name Description
transcript