WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25G6.6.1 Sequence Name  F25G6.6.1
Length (nt)  2132   Chromosome Location  V: 8546174-8548880
Chromosome . Primary Identifier  V Chromosome Location . Start  8546174
Chromosome Location . End  8548880 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25G6.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003816 asns-1 F25G6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25G6.6 F25G6.6 1656   V: 8546288-8546440

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25G6.6.1 8546174 8548880 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190205   267   V: 8546174-8546440 Caenorhabditis elegans
Exon190206   90   V: 8546491-8546580 Caenorhabditis elegans
Exon190207   73   V: 8546643-8546715 Caenorhabditis elegans
Exon190208   132   V: 8546760-8546891 Caenorhabditis elegans
Exon190209   447   V: 8547052-8547498 Caenorhabditis elegans
Exon190210   634   V: 8547547-8548180 Caenorhabditis elegans
Exon190211   489   V: 8548392-8548880 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25G6.6.1 8546174 8548880 1

1 Sequence

Length
2132

1 Sequence Ontology Term

Identifier Name Description
transcript