WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25G6.5b.1 Sequence Name  F25G6.5b.1
Length (nt)  954   Chromosome Location  V: 8550059-8551165
Chromosome . Primary Identifier  V Chromosome Location . Start  8550059
Chromosome Location . End  8551165 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25G6.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006435 stdh-4 F25G6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25G6.5b F25G6.5b 954   V: 8550059-8550227

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25G6.5b.1 8550059 8551165 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190213   169   V: 8550059-8550227 Caenorhabditis elegans
Exon190215   350   V: 8550289-8550638 Caenorhabditis elegans
Exon190217   117   V: 8550685-8550801 Caenorhabditis elegans
Exon190218   318   V: 8550848-8551165 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25G6.5b.1 8550059 8551165 1

1 Sequence

Length
954

1 Sequence Ontology Term

Identifier Name Description
transcript