WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25G6.3.1 Sequence Name  F25G6.3.1
Length (nt)  1822   Chromosome Location  V: 8561216-8564345
Chromosome . Primary Identifier  V Chromosome Location . Start  8561216
Chromosome Location . End  8564345 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25G6.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000055 acr-16 F25G6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25G6.3 F25G6.3 1497   V: 8561269-8561427

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25G6.3.1 8561216 8564345 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190252   212   V: 8561216-8561427 Caenorhabditis elegans
Exon190253   72   V: 8561694-8561765 Caenorhabditis elegans
Exon190254   261   V: 8561818-8562078 Caenorhabditis elegans
Exon190255   103   V: 8562142-8562244 Caenorhabditis elegans
Exon190256   102   V: 8562441-8562542 Caenorhabditis elegans
Exon190257   93   V: 8562586-8562678 Caenorhabditis elegans
Exon190258   87   V: 8562729-8562815 Caenorhabditis elegans
Exon190259   110   V: 8562865-8562974 Caenorhabditis elegans
Exon190260   417   V: 8563171-8563587 Caenorhabditis elegans
Exon190261   365   V: 8563981-8564345 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25G6.3.1 8561216 8564345 1

1 Sequence

Length
1822

1 Sequence Ontology Term

Identifier Name Description
transcript