WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:F41E6.4b.1 Sequence Name  F41E6.4b.1
Length (nt)  2648   Chromosome Location  V: 8611024-8615079
Chromosome . Primary Identifier  V Chromosome Location . Start  8611024
Chromosome Location . End  8615079 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41E6.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018285 smk-1 F41E6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41E6.4b F41E6.4b 2550   V: 8611122-8611136

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41E6.4b.1 8611024 8615079 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190414   113   V: 8611024-8611136 Caenorhabditis elegans
Exon190417   305   V: 8611382-8611686 Caenorhabditis elegans
Exon190421   574   V: 8612179-8612752 Caenorhabditis elegans
Exon190425   261   V: 8612799-8613059 Caenorhabditis elegans
Exon190428   909   V: 8613105-8614013 Caenorhabditis elegans
Exon190432   141   V: 8614063-8614203 Caenorhabditis elegans
Exon190435   345   V: 8614735-8615079 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41E6.4b.1 8611024 8615079 1

1 Sequence

Length
2648

1 Sequence Ontology Term

Identifier Name Description
transcript