WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F41E6.13b Sequence Name  F41E6.13b
Length (nt)  1185   Chromosome Location  V: 8629789-8629799
Chromosome . Primary Identifier  V Chromosome Location . Start  8629789
Chromosome Location . End  8629799
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41E6.13b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30784 ATG-18, isoform b 43.3 394 Caenorhabditis elegans
 

Other

33 RNAi

WormBase ID
WBRNAi00078274
WBRNAi00086905
WBRNAi00086907
WBRNAi00086906
WBRNAi00046990
WBRNAi00014744
WBRNAi00025462
WBRNAi00025463
WBRNAi00089705
WBRNAi00102962
WBRNAi00076407
WBRNAi00089694
WBRNAi00089699
WBRNAi00032091
WBRNAi00073088
WBRNAi00065173
WBRNAi00062510
WBRNAi00089676
WBRNAi00092354
WBRNAi00092353
WBRNAi00027330
WBRNAi00092225
WBRNAi00079863
WBRNAi00098406
WBRNAi00102967
WBRNAi00092284
WBRNAi00092298
WBRNAi00114672
WBRNAi00089683
WBRNAi00089686

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F41E6.13b 8629789 8629799 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018294 atg-18 F41E6.13 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:F41E6.13b 8629789 8629799 -1
CDS:F41E6.13b 8629843 8630030 -1
CDS:F41E6.13b 8630082 8630249 -1
CDS:F41E6.13b 8630328 8630806 -1
CDS:F41E6.13b 8630890 8631062 -1
CDS:F41E6.13b 8631110 8631207 -1
CDS:F41E6.13b 8631258 8631325 -1

1 Sequence

Length
1185

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F41E6.13b.1 F41E6.13b.1 1752   V: 8629224-8631327