WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28A12.3.1 Sequence Name  F28A12.3.1
Length (nt)  618   Chromosome Location  V: 8640596-8641366
Chromosome . Primary Identifier  V Chromosome Location . Start  8640596
Chromosome Location . End  8641366 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28A12.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017880 F28A12.3 F28A12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28A12.3 F28A12.3 483   V: 8640709-8640816

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28A12.3.1 8640596 8641366 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190516   221   V: 8640596-8640816 Caenorhabditis elegans
Exon190517   93   V: 8640866-8640958 Caenorhabditis elegans
Exon190518   56   V: 8641013-8641068 Caenorhabditis elegans
Exon190519   248   V: 8641119-8641366 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28A12.3.1 8640596 8641366 -1

1 Sequence

Length
618

1 Sequence Ontology Term

Identifier Name Description
transcript