WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC196.9a.1 Sequence Name  ZC196.9a.1
Length (nt)  2971   Chromosome Location  V: 8723370-8727177
Chromosome . Primary Identifier  V Chromosome Location . Start  8723370
Chromosome Location . End  8727177 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC196.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022552 ZC196.9 ZC196.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC196.9a ZC196.9a 996   V: 8723522-8723668

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC196.9a.1 8723370 8727177 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190686   299   V: 8723370-8723668 Caenorhabditis elegans
Exon190689   84   V: 8723721-8723804 Caenorhabditis elegans
Exon190691   153   V: 8723856-8724008 Caenorhabditis elegans
Exon190692   184   V: 8724054-8724237 Caenorhabditis elegans
Exon190693   130   V: 8724286-8724415 Caenorhabditis elegans
Exon190694   121   V: 8724512-8724632 Caenorhabditis elegans
Exon190697   144   V: 8724746-8724889 Caenorhabditis elegans
Exon190702   1690   V: 8725132-8726821 Caenorhabditis elegans
Exon190707   96   V: 8726874-8726969 Caenorhabditis elegans
Exon190710   70   V: 8727108-8727177 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC196.9a.1 8723370 8727177 -1

1 Sequence

Length
2971

1 Sequence Ontology Term

Identifier Name Description
transcript