WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC196.5.1 Sequence Name  ZC196.5.1
Length (nt)  1771   Chromosome Location  V: 8729400-8732795
Chromosome . Primary Identifier  V Chromosome Location . Start  8729400
Chromosome Location . End  8732795 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC196.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022549 ZC196.5 ZC196.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC196.5 ZC196.5 1695   V: 8729458-8729649

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC196.5.1 8729400 8732795 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190673   250   V: 8729400-8729649 Caenorhabditis elegans
Exon190674   117   V: 8729696-8729812 Caenorhabditis elegans
Exon190675   57   V: 8730124-8730180 Caenorhabditis elegans
Exon190676   51   V: 8730563-8730613 Caenorhabditis elegans
Exon190677   63   V: 8730657-8730719 Caenorhabditis elegans
Exon190678   95   V: 8731116-8731210 Caenorhabditis elegans
Exon190679   78   V: 8731279-8731356 Caenorhabditis elegans
Exon190680   131   V: 8731404-8731534 Caenorhabditis elegans
Exon190681   151   V: 8731581-8731731 Caenorhabditis elegans
Exon190682   157   V: 8731788-8731944 Caenorhabditis elegans
Exon190683   186   V: 8731989-8732174 Caenorhabditis elegans
Exon190684   51   V: 8732217-8732267 Caenorhabditis elegans
Exon190685   123   V: 8732317-8732439 Caenorhabditis elegans
Exon190686   63   V: 8732490-8732552 Caenorhabditis elegans
Exon190687   198   V: 8732598-8732795 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC196.5.1 8729400 8732795 1

1 Sequence

Length
1771

1 Sequence Ontology Term

Identifier Name Description
transcript