WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC196.4.1 Sequence Name  ZC196.4.1
Length (nt)  1778   Chromosome Location  V: 8733106-8735785
Chromosome . Primary Identifier  V Chromosome Location . Start  8733106
Chromosome Location . End  8735785 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC196.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022548 ZC196.4 ZC196.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC196.4 ZC196.4 1602   V: 8733222-8733257

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC196.4.1 8733106 8735785 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190688   21   V: 8733106-8733126 Caenorhabditis elegans
Exon190689   101   V: 8733157-8733257 Caenorhabditis elegans
Exon190690   114   V: 8733304-8733417 Caenorhabditis elegans
Exon190691   102   V: 8733638-8733739 Caenorhabditis elegans
Exon190692   72   V: 8733889-8733960 Caenorhabditis elegans
Exon190693   147   V: 8734003-8734149 Caenorhabditis elegans
Exon190694   159   V: 8734262-8734420 Caenorhabditis elegans
Exon190695   210   V: 8734481-8734690 Caenorhabditis elegans
Exon190696   189   V: 8734793-8734981 Caenorhabditis elegans
Exon190697   180   V: 8735023-8735202 Caenorhabditis elegans
Exon190698   259   V: 8735250-8735508 Caenorhabditis elegans
Exon190699   224   V: 8735562-8735785 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC196.4.1 8733106 8735785 1

1 Sequence

Length
1778

1 Sequence Ontology Term

Identifier Name Description
transcript