WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC196.3b.1 Sequence Name  ZC196.3b.1
Length (nt)  1351   Chromosome Location  V: 8736674-8738507
Chromosome . Primary Identifier  V Chromosome Location . Start  8736674
Chromosome Location . End  8738507 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC196.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022547 ZC196.3 ZC196.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC196.3b ZC196.3b 1281   V: 8736674-8736766

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC196.3b.1 8736674 8738507 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190701   93   V: 8736674-8736766 Caenorhabditis elegans
Exon190703   84   V: 8736816-8736899 Caenorhabditis elegans
Exon190705   162   V: 8736944-8737105 Caenorhabditis elegans
Exon190707   117   V: 8737151-8737267 Caenorhabditis elegans
Exon190709   51   V: 8737312-8737362 Caenorhabditis elegans
Exon190710   19   V: 8737477-8737495 Caenorhabditis elegans
Exon190712   92   V: 8737541-8737632 Caenorhabditis elegans
Exon190714   189   V: 8737682-8737870 Caenorhabditis elegans
Exon190716   180   V: 8737919-8738098 Caenorhabditis elegans
Exon190717   364   V: 8738144-8738507 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC196.3b.1 8736674 8738507 1

1 Sequence

Length
1351

1 Sequence Ontology Term

Identifier Name Description
transcript