WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0507.6.1 Sequence Name  B0507.6.1
Length (nt)  2142   Chromosome Location  V: 8746158-8750197
Chromosome . Primary Identifier  V Chromosome Location . Start  8746158
Chromosome Location . End  8750197 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0507.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015223 B0507.6 B0507.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0507.6 B0507.6 2118   V: 8746162-8746224

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0507.6.1 8746158 8750197 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190737   67   V: 8746158-8746224 Caenorhabditis elegans
Exon190738   84   V: 8746273-8746356 Caenorhabditis elegans
Exon190739   162   V: 8746412-8746573 Caenorhabditis elegans
Exon190740   120   V: 8747471-8747590 Caenorhabditis elegans
Exon190741   60   V: 8747638-8747697 Caenorhabditis elegans
Exon190742   107   V: 8747880-8747986 Caenorhabditis elegans
Exon190743   490   V: 8748038-8748527 Caenorhabditis elegans
Exon190744   148   V: 8748673-8748820 Caenorhabditis elegans
Exon190745   74   V: 8748917-8748990 Caenorhabditis elegans
Exon190746   323   V: 8749205-8749527 Caenorhabditis elegans
Exon190747   109   V: 8749570-8749678 Caenorhabditis elegans
Exon190748   123   V: 8749726-8749848 Caenorhabditis elegans
Exon190749   275   V: 8749923-8750197 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0507.6.1 8746158 8750197 1

1 Sequence

Length
2142

1 Sequence Ontology Term

Identifier Name Description
transcript