WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0507.10.1 Sequence Name  B0507.10.1
Length (nt)  1430   Chromosome Location  V: 8758820-8760516
Chromosome . Primary Identifier  V Chromosome Location . Start  8758820
Chromosome Location . End  8760516 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0507.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015227 ddn-1 B0507.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0507.10 B0507.10 1209   V: 8759016-8759168

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0507.10.1 8758820 8760516 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190779   349   V: 8758820-8759168 Caenorhabditis elegans
Exon190781   321   V: 8759218-8759538 Caenorhabditis elegans
Exon190782   131   V: 8759607-8759737 Caenorhabditis elegans
Exon190783   407   V: 8759787-8760193 Caenorhabditis elegans
Exon190784   122   V: 8760249-8760370 Caenorhabditis elegans
Exon190785   100   V: 8760417-8760516 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0507.10.1 8758820 8760516 -1

1 Sequence

Length
1430

1 Sequence Ontology Term

Identifier Name Description
transcript