WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0507.11.1 Sequence Name  B0507.11.1
Length (nt)  1051   Chromosome Location  V: 8771899-8773893
Chromosome . Primary Identifier  V Chromosome Location . Start  8771899
Chromosome Location . End  8773893 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0507.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006006 srx-115 B0507.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0507.11 B0507.11 939   V: 8771899-8771940

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0507.11.1 8771899 8773893 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190865   42   V: 8771899-8771940 Caenorhabditis elegans
Exon190866   152   V: 8772479-8772630 Caenorhabditis elegans
Exon190867   230   V: 8772679-8772908 Caenorhabditis elegans
Exon190868   370   V: 8772982-8773351 Caenorhabditis elegans
Exon190869   257   V: 8773637-8773893 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0507.11.1 8771899 8773893 1

1 Sequence

Length
1051

1 Sequence Ontology Term

Identifier Name Description
transcript